IT Software Tools for Life Science and Drug Discovery R&D

Table of Contents

1. Overview of IT Software Tools for Life Science & Drug Discovery R&D

• 1.1 Market Ecosystem of IT Software Tools for Life Science & Drug Discovery R&D
• 1.2 Industry Drug Discovery R&D Applications
  • 1.2.1 Life Science and Drug Discovery R&D Steps
  • 1.2.2 Industrial Scale Drug R&D Factories
  • 1.2.3 Instrumentation Advances Are Driving Need for More IT Solutions
• 1.3 IT Software Tools, Technologies, Equipment & Products for R&D
  • 1.3.1 R&D IT Infrastructure
  • 1.3.2 R&D IT Storage Systems Infrastructure
  • 1.3.3 R&D IT Application Software

2. Activities of IT Software Tools by Key Life Science R&D Segments

• 2.1 Overview of IT Software Tools by Key Life Science R&D Segments
• 2.2 Software Products by Technology Segments
  • Table 1. Technology Segment/Category/Software Name/Software Vendor/Customers
    • T1-1 DNA Array Analysis
    • T1-2 Next Generation Sequecing
    • T1-3 Epigenetics Analysis
    • T1-4 Proteomics
    • T1-5 Cell-Based Analysis
    • T1-6 RNAi Analysis
    • T1-7 Molecular Diagnostics & Testing
    • T1-8 Genetic Biomarker R&D
    • T1-9 R&D Data Integration
    • T1-10 R&D Knowledge Management & Collaboration
    • T1-11 Others: R&D WorkFlow; LIMS; ELNs, etc.
• 2.3 Software Products by Technology Segment & Customer Organization
  • Table 2. Technology Segment/Category/Customer Organization/Software Name/Vendor
    • T2-1 DNA Array Analysis
    • T2-2 Next Generation Sequencing
    • T2-3 Epigenetic Analysis
    • T2-4 Proteomics
    • T2-5 Cell-Based Analysis
    • T2-6 RNAi Analysis
    • T2-7 Molecular Diagnostics & Testing
    • T2-8 Genetic Biomarker R&D
    • T2-9 R&D Data Integration
    • T2-10 R&D Knowledge Management & Collaboration
    • T2-11 Others: R&D WorkFlow; LIMS; ELNs, etc
• 2.4 Software Products by Technology Segment & Services Providers/ Outsourcers
  • Table 3. Technology Segment/Category/Service Provider/Outsourcer/Service Detail
    • T3-1 DNA Array Analysis
    • T3-2 Next Generation Sequencing
    • T3-3 Epigenetic Analysis
    • T3-4 Proteomics
    • T3-5 Cell-Based Analysis
    • T3-6 RNAi Analysis
    • T3-7 Molecular Diagnostic & Testing
    • T3-8 Genetic Biomarker R&D
    • T3-9 R&D Data Integration
    • T3-10 R&D Knowledge Management & Collaboration
    • T3-11 Others: R&D WorkFlow; LIMS; ELNs, Etc.

3. Case Studies

• 3.1 Hospital for Sick Children Research Institute and Genologics
  • 3.1.1 Need for a New Informatics Software Solution
  • 3.1.2 The Solution That Was Selected
  • 3.1.3 Technology Review
  • 3.1.4 Results of Solution
• 3.2 Human Genome Sequencing Center at the Baylor College of Medicine and Data Storage Solution
  • 3.2.1 Need for an IT Storage Systems Solution
  • 3.2.2 The Solution That Was Selected
  • 3.2.3 Technology Review
  • 3.2.4 Results of Solution
• 3.3 Eli Lilly and Discovery Research Knowledge Management Solution
  • 3.3.1 Need for a Software Solution
  • 3.3.2 The Solution That Was Selected
  • 3.3.3 Technology Review
  • 3.3.4 Results of Solution
• 3.4 Sanofi-Aventis and In Silico Drug Discovery
  • 3.4.1 Need for a Software Solution
  • 3.4.2 The Software Solution That Was Selected
  • 3.4.3 Technology Review
  • 3.4.4 Results of Solution
• 3.5 Biogen Idec, Inc. and Tibco Spotfire DecisionSite
  • 3.5.1 Need for a Software Solution
  • 3.5.2 The Solution That Was Selected
  • 3.5.3 Technology Review
  • 3.5.4 Results of Solution

4. WW Software Tools & IT Services Market Forecast for Life Science and Drug R&D

• 4.1 Methodology Used for This Report
  • 4.1.1 Methodology
  • 4.1.2 Definitions
  • 4.1.3 Research Information Sources
• 4.2 WW Market Forecast (Total)
• 4.3 WW Market Forecast by Technologies
  • 4.3.1 Revenues by Technology Segment, 2008-2013
  • 4.3.2 Market Shares by Technology Segments, 2008 & 2013
• 4.4 WW Market Forecast by Customer Organization Segments
  • 4.4.1 Revenues by Customer Organization Segments, 2008-2013
    • 4.4.1.1 Academic, Government
    • 4.4.1.2 R&D Service Provider
    • 4.4.1.3 Pharma, Biotech
    • 4.4.1.4 Other
  • 4.4.2 Market Shares by Customer Organization Segments, 2008 & 2013
• 4.5 WW Market Forecast by Regions
  • 4.5.1 Revenues by Regions, 2008-2013
    • 4.5.1.1 US
    • 4.5.1.2 Europe
    • 4.5.1.3 Asia Pacific
    • 4.5.1.4 ROW
  • 4.5.2 Market Shares by Region, 2008 & 2013

5. Company Profiles: IT Software Tools

• 5.1 Equipment
  • 5.1.1 Affymetrix, Inc.
  • 5.1.2 Agilent Technologies, Inc., BAM/LS
  • 5.1.3 BlueArc Corporation
  • 5.1.4 Isilon Systems, Inc.
  • 5.1.5 Life Technologies, Inc.
  • 5.1.6 ThermoFisher Scientific Inc.
• 5.2 Services
  • 5.2.1 BioTeam, Inc.
  • 5.2.2 Cogenics (Div. Of Clinical Data)
  • 5.2.3 Complete Genomics, Inc.
  • 5.2.4 GATC Biotech AG
  • 5.2.5 Genpathway, Inc.
  • 5.2.6 Ocimum Biosolutions Ltd.
• 5.3 Software
  • 5.3.1 Accelrys, Inc.
  • 5.3.2 CLC bio 119
  • 5.3.3 DNASTAR, Inc.
  • 5.3.4 Entelos, Inc.
  • 5.3.5 Gene Codes Corporation
  • 5.3.6 GeneGo, Inc.
  • 5.3.7 Genomatix Software GmbH
  • 5.3.8 GenomeQuest, Inc.
  • 5.3.9 Symyx Technologies,Inc.

6. Conclusions

7. Addendum: Revenue Forecast Outlook Detail Tables by Technology Segements

8. Appendix 1

• 8.1 Key Life Science R&D Centers
• 8.2 Selected Company Links

9. Appendix 2

• 9.1 Glossary - Life Science Terms

List of Tables

• Table 1. Technology Segment/Category/Software Name/Software Vendor/Customers
• T1-1 DNA Array Analysis
• T1-2 Next Generation Sequecing
• T1-3 Epigenetics Analysis
• T1-4 Proteomics
• T1-5 Cell-Based Analysis
• T1-6 RNAi Analysis
• T1-7 Molecular Diagnostics & Testing
• T1-8 Genetic Biomarker R&D
• T1-9 R&D Data Integration
• T1-10 R&D Knowledge Management & Collaboration
• T1-11 Others: R&D WorkFlow; LIMS; ELNs, etc.
• Table 2. Technology Segment/Category/Customer Organization/Software Name/Vendor
• T2-1 DNA Array Analysis
• T2-2 Next Generation Sequecing
• T2-3 Epigenetics Analysis
• T2-4 Proteomics
• T2-5 Cell-Based Analysis
• T2-6 RNAi Analysis
• T2-7 Molecular Diagnostics & Testing
• T2-8 Genetic Biomarker R&D
• T2-9 R&D Data Integration
• T2-10 R&D Knowledge Management & Collaboration
• T2-11 Others: R&D WorkFlow; LIMS; ELNs, etc.
• Table 3. Technology Segment/Category/Service Provider/Outsourcer/Service Detail
• T3-1 DNA Array Analysis
• T3-2 Next Generation Sequecing
• T3-3 Epigenetics Analysis
• T3-4 Proteomics
• T3-5 Cell-Based Analysis
• T3-6 RNAi Analysis
• T3-7 Molecular Diagnostics & Testing
• T3-8 Genetic Biomarker R&D
• T3-9 R&D Data Integration
• T3-10 R&D Knowledge Management & Collaboration
• T3-11 Others: R&D WorkFlow; LIMS; ELNs, etc.
• Table 4. Rackable Compute Servers
• Table 5. Rackable Storage Servers
• Table 6. Total WW Market Forecast, 2008-2013
• Table 7. WW Revenues by Technology Segments, 2008-2013
• Table 8. WW Market Shares by Technology Segments, 2008 & 2013
• Table 9. WW Revenues by Customer Org. Segments, 2008-2013
• Table 10. WW Market Shares by Customer Org. Segments, 2008 & 2013
• Table 11. WW Revenues by Regions, 2008-2013
• Table 12. WW Market Shares by Regions, 2008 & 2013
• Table 13. Examples of Pharma Knowledge Management Systems
• Table 14. Selected Pre-Competitive R&D Information Sharing Arrangements
• Table 15. Addendum: DNA Array Analysis Revenue Detail, 2008-2013
• Table 16. Addendum: Next-Generation Sequencing Analysis Revenue Detail, 2008-2013
• Table 17. Addendum: Epigenetic Analysis Revenue Detail, 2008-2013
• Table 18. Addendum: Proteomics Analysis Revenue Detail, 2008-2013
• Table 19. Addendum: Cell-Based Analysis Revenue Detail, 2008-2013
• Table 20. Addendum: Genetic Biomarker R&D Revenue Detail, 2008-2013l
• Table 21. Addendum: RNAi Analysis Revenue Detail, 2008-2013
• Table 22. Addendum: Molecular Diagnostics Revenue Detail, 2008-2013
• Table 23. Addendum: R&D Data Integration; Content Mgt. Revenue Detail, 2008-2013
• Table 24. Addendum: R&D Knowledge Mgt. & Collab. Revenue Detail, 2008-2013
• Table 25. Addendum: R&D Other: Workflows, LIMS, ELNs Revenue Detail, 2008-2013
• Table 26. Large International Life Science R&D Centers
• Table 27. Selected Companies By Product Area
• Table 28. Glossary - Life Science Terms

List of Illustrations

• Figure 1. The IT Software Tools for Life Science & Drug Discovery R&D Market Ecosystem
• Figure 2. The Drug Research and Development Path to Final Approval
• Figure 3. The “Drug Discovery” Steps of the Drug R&D Process
• Figure 4. Rackable C1001 Compute Server
• Figure 5. Rackable S3012 Storage Server
• Figure 6. Mobius Quick Search - All Data View
• Figure 7. Tibco SpotFire DecisionSite
• Figure 8. Total WW Market Forecast, 2008-2013
• Figure 9. WW Market Revenues by Technology Segments, 2008-2013
• Figure 10. WW Market Shares by Technology Segments, 2008 & 2013
• Figure 11. WW Market Revenues by Customer Org. Segments, 2008-2013
• Figure 12. WW Market Shares by Customer Org. Segments, 2008 & 2013
• Figure 13. WW Market Revenues By Regions, 2008-2013
• Figure 14. WW Market Shares by Regions, 2008 & 2013