Table of Contents
1. Executive Summary
- A. Overview
- 1. Introduction
- 2. Scope
2. Introduction
- A. Bioinformatics Background
- 1. Introduction
- 2. The Birth of Bioinformatics: Too Much Data
- 3. Now: Still Too Much Data
- 4. Bioinformatics: What Is It Good For?
- 5. Pharmaceuticals Applications
- 6. IT Companies Enter the Fray
3. Technology Synopsis
- A. Technology Description
- 1. Bioinformatics Systems
- 2. Background: Proteomics; Genomics; and Combinatorial Chemistry
4. Markets Overview
- A. Market Analysis
- 1. Introduction
- 2. Bioinformatics Markets
- 3. Other Markets That Will Affect Bioinformatics
- 4. Case Study: Bioinformatics in Asia
5. Market Dynamics
- A. Challenges And Barriers
- 1. Investors Fall Out of Love
- 2. Standardization
- 3. Genes Were Easy--Proteins Are Hard
- 4. Help Wanted
- 5. Too Many Bytes
- 6. From Skills to Skill Sets
- 7. Error Breeds Error
- 8. Other Challenges
- 9. Conclusion: Just Three Things
6. Profiles of Major Players
- A. Key Companies and Research Groups, A through M
- 1. 3-D Pharmaceuticals
- 2. 3rd Millennium
- 3. Asia Pacific Bioinformatics Network
- 4. Alphagene
- 5. ArQule Inc.
- 6. Automated Cell Inc.
- 7. Cadus Pharmaceutical Corp.
- 8. California Institute of Technology
- 9. Caprion Pharmaceuticals Inc.
- 10. Case Western Reserve University
- 11. Celera Genomics
- 12. Cellnomica Inc.
- 13. Cellomics Inc.
- 14. Cognia Corporation
- 15. Cold Spring Harbor Laboratory
- 16. Compugen
- 17. Cornell University
- 18. Cray Inc.
- 19. CuraGen Corporation
- 20. Brookhaven National Laboratory
- 21. Entelos Inc.
- 22. European Molecular Biology Organization (EMBO)
- 23. Exelixis Inc.
- 24. ExonHit Therapeutics Inc.
- 25. Genaissance Pharmaceuticals Inc
- 26. Gene Network Sciences
- 27. GeneData AG
- 28. Gene Logic
- 29. GeneFormatics Inc.
- 30. Genostar Consortium
- 31. Genzyme Molecular Oncology and Silico Insights
- 32. Geospiza Inc.
- 33. Glycominds Inc.
- 34. Hitachi
- 35. Hybrigenics
- 36. University of Idaho
- 37. Immusol Inc.
- 38. IBM
- 39. Incyte Genomics Inc.
- 40. Inpharmatica Ltd
- 41. Institute for Systems Biology
- 42. Integrated Genomics Inc.
- 43. Interleukin Genetics Inc. and Genome Therapeutics Inc.
- 44. Interoperable Informatics Infrastructure Consortium (I3C)
- 45. Kenna Technologies
- 46. LifeSpan BioSciences Inc.
- 47. Lion Bioscience
- 48. Massachusettes Institute of Technology
- 49. McGill University Launches Centre for Bioinformatics
- 50. MDL Information Systems Inc.
- 51. MDS Proteomics
- 52. Microarray Gene Expression Data Group (MGED)
- 53. Molecular Mining Corp.
- 54. Myriad Genetics Inc.
- B. Key Companies and Research Groups; N through Z
- 1. National Resource for Cell Analysis and Modeling (NRCAM); University of Connecticut
- 2. National Center for Genome Resources (US)
- 3. National Cancer Institute (US)
- 4. National Institute of General Medical Sciences (US)
- 5. NIH's National Center for Biotechnology Information (NCBI)
- 6. Norwegian Radium Hospital
- 7. Oak Ridge National Laboratory
- 8. Oracle Corp.
- 9. O'Reilly and Electric Genetics: Bioinformatics Technology Conference and Bio-hackathon
- 10. Pacific Northwest National Laboratory
- 11. Parabon Computation Inc.
- 12. Paracel
- 13. Paradigm Genetics
- 14. Pharsight Corporation
- 15. Physiome Sciences
- 16. Proteome Systems Ltd.
- 17. Purdue University
- 18. Rosetta Biosoftware
- 19. Shanghai Genecore Biotechnologies Co. Ltd.
- 20. Space Telescope Science Institute
- 21. Spotfire Inc.
- 22. Stanford University and Intel Corp.
- 23. State University of Groningen
- 24. Structural Bioinformatics Inc.
- 25. Structural GenomiX
- 26. TIGR (The Institute for Genomic Research)
- 27. Tripos Inc.
- 28. TurboGenomics
- 29. University of Illinois; Urbana-Champaign
- 30. University of Pennsylvania
- 31. University of Washington
- 32. University of Chicago and Sun Microsystems
- 33. Uppsala University; Sweden
- 34. US Dept. of Agriculture (USDA)
- 35. US Department of Energy
- 36. National Institutes of Health (NIH)
- 37. Virginia Bioinformatics Institute and Virginia Tech
- 38. Visualize Life Sciences Group
- 39. XTL Biopharmaceuticals Ltd. And Hybrigenics
- 40. Zygogen LLC and Nutec Sciences Inc.
7. Technical Insights' 2002 Science and Technology Awards
- A. Technology Innovation
- 1. Introduction
- 2. ZymoGenetics Inc.
- B. Technology Leadership
- 1. Introduction
- 2. Accelrys Inc.
8. Appendices
- A. Patents; Websites; Contacts; Books
- 1. Appendix A: Recent Patents with Applications in Bioinformatics
- 2. Appendix B: Useful Websites
- 3. Appendix C: Contact Information
- 4. Appendix D: Introductory Books on Bioinformatics
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